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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012606.1_4072_4161_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4072 - 4161

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGACAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGGCAT

U12 Branch Point Sequence:

CTGTCCCCCACA

Flanking Amino Acid:

VLNTATLVQEHTLHVGQDSG

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

67.8

39.3

Major BPS

46.9

-0.1

1.6

57.1

49.4

Major PPT

0.5

0.8

65.2

30.7

Minor 5ss

29.9

-2.3

3.3

38.1

46.8

Minor BPS

45.2

-0.3

2.3

60.08

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007384

Chromosome:

PEDO01012606.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008823

68 - 5279

5212

ENSAPLT00000007655

255 - 5279

5025