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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012606.1_4337_4989_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4337 - 4989

Intron Length:

653

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGACCC

5'SS Class:

strong_major

3'SS Sequence:

AGAAATCAGAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTGAA

U12 Branch Point Sequence:

TTGCTGTGAAAT

Flanking Amino Acid:

VTPPVHKMLAATTKSHATIA

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

65.2

Major BPS

59.7

0.24

1.2

52.7

43.2

Major PPT

44.4

-0.3

1.2

34.6

39.4

Minor 5ss

33.4

-1.9

3.1

41.2

38.9

Minor BPS

45.6

-0.2

2.2

67.25

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007384

Chromosome:

PEDO01012606.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008823

68 - 5279

5212

ENSAPLT00000007655

255 - 5279

5025