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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012620.1_386_523_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

386 - 523

Intron Length:

138

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCAAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

TGCCCCCAAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

ATTTTCACGACA

Flanking Amino Acid:

KNIHKKKRLLNLSLTPEIYL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.1

77.5

34.7

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

60.7

0.24

34.2

Minor 5ss

24.2

-3

4.4

37.6

41.6

Minor BPS

51.3

0.04

1.8

69.74

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021672

Chromosome:

PEDO01012620.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029636

252 - 2251

2000