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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012664.1_3307_4993_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3307 - 4993

Intron Length:

1687

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTCTG

5'SS Class:

major

3'SS Sequence:

TTGTTTGTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTAAAAG

U12 Branch Point Sequence:

TTGTTTGTCATA

Flanking Amino Acid:

SLKPTGGYITGDQARTFFLQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.2

64.8

46.6

Major BPS

41.7

-0.5

1.6

47.4

Major PPT

76.4

0.59

0.9

72.4

37.8

Minor 5ss

32.8

-2

3.1

41.2

45.2

Minor BPS

-0.4

2.3

61.45

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024774

Chromosome:

PEDO01012664.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032065

266 - 6479

6214