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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012671.1_205_4056_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

205 - 4056

Intron Length:

3852

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TCTACGGGTGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCTCTAC

U12 Branch Point Sequence:

TGCTGCTCTACG

Flanking Amino Acid:

QMGTNKCASQGRQRLGQSPP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

43.5

-0.4

1.4

38.1

41.1

Major PPT

52.7

0.06

1.2

51.8

41.8

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

44.3

-0.6

2.3

52.54

47.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029553

Chromosome:

PEDO01012671.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019905

58 - 4146

4089