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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012684.1_408_3113_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

408 - 3113

Intron Length:

2706

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACG|GCCGGGCGC

5'SS Class:

major

3'SS Sequence:

TTCCCAAAACGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCCCAA

U12 Branch Point Sequence:

TCTTCCCAAAAC

Flanking Amino Acid:

AGPRCCCPHTSQITPQIPVD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.3

0.29

1.3

53.9

Major BPS

63.1

0.33

1.2

72.7

34.3

Major PPT

45.5

-0.2

1.7

45.5

39.5

Minor 5ss

15.3

-4

3.7

24.5

37.1

Minor BPS

50.2

-0

2.1

68.28

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024902

Chromosome:

PEDO01012684.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042207

63 - 3296

3234