Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012717.1_8035_8832_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8035 - 8832

Intron Length:

798

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGTACA

5'SS Class:

major

3'SS Sequence:

TGTCGCCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

TCCCCCCTAACC

Flanking Amino Acid:

AIDNKIEQAMDLVKSHLMYA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

73.5

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

70.6

0.46

0.9

66.3

35.8

Minor 5ss

35.1

-1.7

2.8

40.3

40.4

Minor BPS

60.5

0.31

1.8

68.84

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021858

Chromosome:

PEDO01012717.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023156

7489 - 9417

1929