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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012724.1_294_476_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

294 - 476

Intron Length:

183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGAAAGA

5'SS Class:

major

3'SS Sequence:

GTTTGGGTAAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

CAGAATTAAACT

Flanking Amino Acid:

LCDVAKKQWHCVQRLQLQPE

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.2

0.34

1.1

57.7

41.3

Major BPS

73.8

0.59

0.9

26.8

Major PPT

53.2

0.07

1.2

52.6

45.2

Minor 5ss

30.9

-2.2

3.2

42.3

Minor BPS

45.8

-0.2

1.8

58.37

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019827

Chromosome:

PEDO01012724.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019236

173 - 1874

1702