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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012726.1_3147_4755_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3147 - 4755

Intron Length:

1609

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCT|GCCGGTACC

5'SS Class:

weak_major

3'SS Sequence:

CAGAAACCCACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GACACAT

U12 Branch Point Sequence:

TATGCAGAAACC

Flanking Amino Acid:

HYTGECPPPAGALGTASPAG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.2

0.03

1.5

65.1

37.2

Major BPS

52.1

0.05

1.2

37.5

Major PPT

53.4

0.08

43.3

Minor 5ss

23.6

-3

3.7

Minor BPS

42.9

-0.5

2.5

60.38

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021358

Chromosome:

PEDO01012726.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037124

3081 - 5004

1924