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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012746.1_4214_4395_F

Intron Information:

Intron Rank:

132135

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4214 - 4395

Intron Length:

182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCCCCCC

5'SS Class:

weak_major

3'SS Sequence:

CCCTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

TCCCCGCTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.5

0.22

1.2

47.8

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

81.6

0.71

0.7

75.8

26.2

Minor 5ss

38.2

-1.3

3.2

51.8

44.9

Minor BPS

41.2

-0.6

2.6

61.62

47.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021010

Chromosome:

PEDO01012746.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025587

21 - 4438

4418