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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012765.1_942_1156_R

Intron Information:

Intron Rank:

131976

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

942 - 1156

Intron Length:

215

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTG|GCGGCAGCG

5'SS Class:

weak_major

3'SS Sequence:

GGCGGAGGAGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACAAAA

U12 Branch Point Sequence:

CAAAACAGAGGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.3

0.05

1.3

48.1

39.3

Major BPS

60.3

0.26

65.5

Major PPT

37.6

-0.7

1.6

24.4

35.9

Minor 5ss

19.3

-3.5

26.4

39.1

Minor BPS

31.4

-1.4

1.8

33.58

33.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018244

Chromosome:

PEDO01012765.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029835

781 - 1283

503