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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012768.1_4437_4881_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4437 - 4881

Intron Length:

445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGCG

5'SS Class:

strong_major

3'SS Sequence:

TCATCCCCAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTCAT

U12 Branch Point Sequence:

CCTCCGTCACCT

Flanking Amino Acid:

GTERFPSVSEMSLNRNSVLS

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

68.6

36.5

Major BPS

59.9

0.25

1.3

43.2

Major PPT

68.6

0.42

0.9

63.6

32.5

Minor 5ss

25.3

-2.8

3.1

30.1

43.1

Minor BPS

42.4

-0.4

2.4

61.08

48.3

Associated Gene:

Gene:

ARHGEF11

Ensembl Gene ID:

ENSAPLG00000010719

Chromosome:

PEDO01012768.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011175

1249 - 7975

6727

Gene:

Ensembl Gene ID:

ENSAPLG00000020571

Chromosome:

PEDO01012768.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032789

2697 - 11383

8687