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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012768.1_5221_5594_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5221 - 5594

Intron Length:

374

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGCAGCG

5'SS Class:

major

3'SS Sequence:

CCGGGTCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTAAC

U12 Branch Point Sequence:

CCCTGCCTAACC

Flanking Amino Acid:

DYDPGYFNNECDSLFQDLAK

Intron Amino Acid Position:

342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.6

0.37

1.2

54.3

43.4

Major BPS

54.3

0.11

1.2

57.5

37.5

Major PPT

65.9

0.36

57.6

38.6

Minor 5ss

34.9

-1.7

3.6

47.8

47.9

Minor BPS

-0.1

2.1

58.49

46.6

Associated Gene:

Gene:

ARHGEF11

Ensembl Gene ID:

ENSAPLG00000010719

Chromosome:

PEDO01012768.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011175

1249 - 7975

6727

Gene:

Ensembl Gene ID:

ENSAPLG00000020571

Chromosome:

PEDO01012768.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032789

2697 - 11383

8687