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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012768.1_6959_7053_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

6959 - 7053

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGCCCAG

5'SS Class:

weak_major

3'SS Sequence:

CGTGTGTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

TGGCGCTGAGCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.1

0.21

1.2

46.7

45.2

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

68.3

0.41

61.2

40.1

Minor 5ss

35.9

-1.6

3.3

46.2

49.1

Minor BPS

43.8

-0.4

53.8

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020571

Chromosome:

PEDO01012768.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032789

2697 - 11383

8687