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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012768.1_7395_7758_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7395 - 7758

Intron Length:

364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

TCGCCCCCAGCT

Flanking Amino Acid:

DILSKYEEDRSSPMAFALST

Intron Amino Acid Position:

505

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.5

32.9

Major BPS

0.28

1.1

63.1

35.8

Major PPT

81.7

0.71

0.8

37.3

Minor 5ss

26.6

-2.7

30.5

43.3

Minor BPS

44.3

-0.3

2.1

62.72

46.7

Associated Gene:

Gene:

ARHGEF11

Ensembl Gene ID:

ENSAPLG00000010719

Chromosome:

PEDO01012768.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011175

1249 - 7975

6727

Gene:

Ensembl Gene ID:

ENSAPLG00000020571

Chromosome:

PEDO01012768.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032789

2697 - 11383

8687