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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012768.1_8928_9067_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

8928 - 9067

Intron Length:

140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGGTGG

5'SS Class:

major

3'SS Sequence:

CTCCCCGCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAC

U12 Branch Point Sequence:

TCGGCCTGACCG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.2

52.2

47.1

Major BPS

51.1

0.03

1.2

39.9

Major PPT

71.9

0.49

0.9

64.9

30.7

Minor 5ss

34.3

-1.8

3.5

37.3

47.4

Minor BPS

-0.3

1.9

51.53

48.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020571

Chromosome:

PEDO01012768.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032789

2697 - 11383

8687