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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012768.1_9248_9548_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

9248 - 9548

Intron Length:

301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGAGCC

5'SS Class:

major

3'SS Sequence:

GTCCCTTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTGAT

U12 Branch Point Sequence:

TGTCCCTTTCCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

63.2

36.7

Major BPS

49.3

-0

1.5

42.8

49.4

Major PPT

76.4

0.59

0.8

68.2

37.4

Minor 5ss

24.9

-2.9

3.3

32.9

42.4

Minor BPS

43.8

-0.5

3.6

69.39

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020571

Chromosome:

PEDO01012768.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032789

2697 - 11383

8687