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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012768.1_9616_12348_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9616 - 12348

Intron Length:

2733

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CGG|GCGAAAAGA

5'SS Class:

weak_major

3'SS Sequence:

GAGGCGATGGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAGGGAA

U12 Branch Point Sequence:

CTGTAGGGAACC

Flanking Amino Acid:

MMKRARLSAPALAGPLTCVP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.3

0.22

1.3

54.9

41.6

Major BPS

45.8

-0.2

1.4

41.1

41.4

Major PPT

-0

1.2

39.8

43.4

Minor 5ss

-3.9

3.3

13.5

28.4

Minor BPS

37.7

-0.9

2.6

51.66

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020397

Chromosome:

PEDO01012768.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042326

9323 - 12379

3057