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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012780.1_676_804_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

676 - 804

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGGCCG

5'SS Class:

major

3'SS Sequence:

GTGGCGCCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGCCAT

U12 Branch Point Sequence:

CCATGGCGACCA

Flanking Amino Acid:

PLPDFRDGTKATFHYRTLRC

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

54.2

44.5

Major BPS

62.2

0.3

1.4

72.5

43.5

Major PPT

59.3

0.21

50.7

39.3

Minor 5ss

24.6

-2.9

3.2

30.3

42.9

Minor BPS

29.8

-1.5

2.4

36.97

Associated Gene:

Gene:

AIP

Ensembl Gene ID:

ENSAPLG00000013838

Chromosome:

PEDO01012780.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014428

21 - 3498

3478