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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012780.1_985_1349_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

985 - 1349

Intron Length:

365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGGAGG

5'SS Class:

major

3'SS Sequence:

TGCCGCCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

CCCTTCCTAATT

Flanking Amino Acid:

ERARFRCDAKHVVLYPLVAK

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

60.4

45.8

Major BPS

81.9

0.79

0.9

80.1

Major PPT

64.7

0.33

0.9

54.2

36.6

Minor 5ss

24.8

-2.9

3.1

30.1

43.2

Minor BPS

54.4

0.22

1.7

67.26

44.4

Associated Gene:

Gene:

AIP

Ensembl Gene ID:

ENSAPLG00000013838

Chromosome:

PEDO01012780.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014428

21 - 3498

3478