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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012807.1_1343_1774_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1343 - 1774

Intron Length:
432

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAC|GTAAGGGGG

5'SS Class:
major

3'SS Sequence:
TTCATCCCTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCTTCAT

U12 Branch Point Sequence:
TATTCCTTCATC

Flanking Amino Acid:
ETNEIANANSRQQIRKLIKD

Intron Amino Acid Position:
36

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.2
0.48
1.3
58.7
46.2

Major BPS
75
0.62
1.1
77.2
36

Major PPT
79.2
0.66
0.8
70.1
36.4

Minor 5ss
30
-2.3
3.5
36.6
41.3

Minor BPS
71.4
0.65
1.7
79.47
35.9

Associated Gene:

Gene:
RPL19

Ensembl Gene ID:

Chromosome:
PEDO01012807.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 2109
2089