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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012807.1_703_902_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
703 - 902

Intron Length:
200

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAT|GTGAGCCTT

5'SS Class:
major

3'SS Sequence:
TCTGCTCCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTCAC

U12 Branch Point Sequence:
CCTCTCACACTT

Flanking Amino Acid:
YRESKKIDRHMYHSLYLKVK

Intron Amino Acid Position:
117

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.2
0.57
1.1
70.8
41

Major BPS
72.7
0.56
1
75
30.1

Major PPT
75.3
0.57
0.8
69.4
31.2

Minor 5ss
40.8
-1
3.3
61.1
43.6

Minor BPS
40.2
-0.6
1.9
53.58
42.3

Associated Gene:

Gene:
RPL19

Ensembl Gene ID:

Chromosome:
PEDO01012807.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 2109
2089