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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012809.1_2419_2978_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2419 - 2978

Intron Length:

560

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TTGCTCTTATTT

Flanking Amino Acid:

RKQAAQRRELEKQAAELAWR

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

71.4

40.3

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

92.2

0.95

0.6

84.9

29.9

Minor 5ss

-2.2

2.9

34.5

Minor BPS

61.4

0.44

1.6

76.67

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024220

Chromosome:

PEDO01012809.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021597

21 - 4427

4407