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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012809.1_3000_3157_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3000 - 3157

Intron Length:

158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

TGGGCTGTGACC

Flanking Amino Acid:

RELEKQAAELAWRKFLLPHN

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

79.6

34.4

Major BPS

0.22

1.2

52.4

43.3

Major PPT

81.7

0.71

0.7

72.7

32.1

Minor 5ss

36.8

-1.5

3.3

44.3

43.6

Minor BPS

46.5

-0.2

2.1

57.52

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024220

Chromosome:

PEDO01012809.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040873

21 - 4427

4407

ENSAPLT00000021597

21 - 4427

4407