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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012868.1_538_709_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

538 - 709

Intron Length:

172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

CGTCTGTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCCC

U12 Branch Point Sequence:

CCTTCCTCCCCT

Flanking Amino Acid:

ARPEHDKAAQGSPKGSPPFE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

35.6

-0.9

4.2

77.4

37.4

Major PPT

71.3

0.48

0.9

64.8

36.4

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

38.9

-0.7

3.6

67.41

49.1

Associated Gene:

Gene:

ARX

Ensembl Gene ID:

ENSAPLG00000017518

Chromosome:

PEDO01012868.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037118

21 - 2967

2947