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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012882.1_1419_1490_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1419 - 1490

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAAGATC

5'SS Class:

major

3'SS Sequence:

GCCCCCCAAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCCCAA

U12 Branch Point Sequence:

TGCCCCCCAAAA

Flanking Amino Acid:

LIVRPDNTYEIKDPEAKKPE

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

0.9

75.4

34.2

Major BPS

45.3

-0.2

1.2

35.2

Major PPT

48.2

-0.1

45.3

28.6

Minor 5ss

30.7

-2.2

3.3

42.1

Minor BPS

45.3

-0.3

1.9

56.6

41.6

Associated Gene:

Gene:

CALR

Ensembl Gene ID:

ENSAPLG00000019978

Chromosome:

PEDO01012882.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025389

21 - 3401

3381