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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012894.1_853_1801_F

Intron Information:

Intron Rank:

129798

Intron Class:

major

Intron Phase:

Intron Coordinates:

853 - 1801

Intron Length:

949

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAAGAA

5'SS Class:

strong_major

3'SS Sequence:

CTCGTCTCAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

TAAGCTTTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

73.7

30.1

Major BPS

77.3

0.68

79.3

29.4

Major PPT

66.5

0.37

0.9

62.1

33.5

Minor 5ss

29.1

-2.4

3.4

37.8

Minor BPS

73.2

0.81

1.3

81.94

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019844

Chromosome:

PEDO01012894.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038688

26 - 2850

2825