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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012904.1_2079_2359_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2079 - 2359

Intron Length:

281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGGCCGTG

5'SS Class:

weak_major

3'SS Sequence:

TGGAGGAGCTGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTGGAG

U12 Branch Point Sequence:

AGAGCCTGGAGG

Flanking Amino Acid:

VFGLEAVHLQVTGNTVLGFS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.8

0.04

1.2

45.1

Major BPS

-0.4

1.8

42.8

49.4

Major PPT

40.9

-0.5

1.7

35.6

44.6

Minor 5ss

38.2

-1.3

3.6

45.5

49.6

Minor BPS

43.1

-0.6

1.9

42.99

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016552

Chromosome:

PEDO01012904.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026042

446 - 2507

2062