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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012935.1_3740_3947_R

Intron Information:

Intron Rank:

138978

Intron Class:

major

Intron Phase:

Intron Coordinates:

3740 - 3947

Intron Length:

208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

ACTCTCTCACCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

72.7

0.56

30.1

Major PPT

95.8

1.03

0.5

92.1

18.3

Minor 5ss

38.3

-1.3

45.5

42.6

Minor BPS

47.9

-0.1

1.8

58.93

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022268

Chromosome:

PEDO01012935.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025879

3211 - 4827

1617