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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012974.1_3717_3913_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3717 - 3913

Intron Length:

197

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAT|GCAGAGGGG

5'SS Class:

weak_major

3'SS Sequence:

AGTGGGAGTCGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTCCAG

U12 Branch Point Sequence:

GCTTCCAGTACG

Flanking Amino Acid:

IHYLLQSVQH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.7

0.23

1.3

54.7

39.5

Major BPS

46.4

-0.2

1.7

61.8

44.5

Major PPT

42.3

-0.4

1.7

32.4

45.2

Minor 5ss

18.7

-3.6

4.3

31.2

43.6

Minor BPS

45.6

-0.4

2.1

54.41

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009664

Chromosome:

PEDO01012974.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046851

2640 - 3915

1276