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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012974.1_4385_5056_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4385 - 5056

Intron Length:

672

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTGCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAC

U12 Branch Point Sequence:

CCCATGTCACCT

Flanking Amino Acid:

RENAPRVQAKIIVEAANGPT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

69.8

42.4

Major BPS

66.1

0.4

1.2

69.1

37.9

Major PPT

80.7

0.69

0.9

76.9

37.3

Minor 5ss

30.6

-2.2

3.3

40.1

45.6

Minor BPS

36.8

-0.9

2.2

47.3

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009664

Chromosome:

PEDO01012974.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010080

2640 - 5334

2695