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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012976.1_22412_23078_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22412 - 23078

Intron Length:

667

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAGA

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGCGAT

U12 Branch Point Sequence:

GGAACCCAAATT

Flanking Amino Acid:

MRLNQASMDKLYDLMTMAFK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

74.1

36.4

Major BPS

58.6

0.21

1.5

58.2

48.3

Major PPT

86.1

0.81

0.8

80.6

Minor 5ss

32.2

-2

40.7

45.1

Minor BPS

45.3

-0.2

60.31

42.7

Associated Gene:

Gene:

OSCP1

Ensembl Gene ID:

ENSAPLG00000008275

Chromosome:

PEDO01012976.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031173

16820 - 28467

11648

ENSAPLT00000021016

16820 - 28277

11458

ENSAPLT00000008626

22133 - 27701

5569