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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012976.1_23247_23798_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23247 - 23798

Intron Length:

552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGAATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTACAA

U12 Branch Point Sequence:

GTACTCTTACAA

Flanking Amino Acid:

VDETFRQLIEVYGSLSAGEF

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

81.8

29.7

Major BPS

61.2

0.28

1.1

70.6

34.3

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

39.7

-1.1

3.1

53.3

37.6

Minor BPS

49.2

-0

1.7

59.66

39.5

Associated Gene:

Gene:

OSCP1

Ensembl Gene ID:

ENSAPLG00000008275

Chromosome:

PEDO01012976.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031173

16820 - 28467

11648

ENSAPLT00000021016

16820 - 28277

11458

ENSAPLT00000008626

22133 - 27701

5569