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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012976.1_25714_26241_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25714 - 26241

Intron Length:

528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAC

U12 Branch Point Sequence:

GACCGCTGAACC

Flanking Amino Acid:

SSKNLASHAKENVAPNPLAK

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

1.1

80.8

31.8

Major BPS

63.7

0.34

1.2

41.8

Major PPT

85.3

0.79

0.8

80.7

31.4

Minor 5ss

33.6

-1.9

3.1

44.2

43.6

Minor BPS

47.4

-0.2

1.9

55.04

42.3

Associated Gene:

Gene:

OSCP1

Ensembl Gene ID:

ENSAPLG00000008275

Chromosome:

PEDO01012976.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031173

16820 - 28467

11648

ENSAPLT00000021016

16820 - 28277

11458

ENSAPLT00000008626

22133 - 27701

5569