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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012976.1_26382_27087_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

26382 - 27087

Intron Length:

706

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTATGCTCA

5'SS Class:

weak_major

3'SS Sequence:

CTATTTTTAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

CTATTTTTAATA

Flanking Amino Acid:

LNLFTTDEEEEQAALTRPEE

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.6

0.27

1.1

54.9

39.1

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

0.59

0.9

73.5

35.6

Minor 5ss

55.3

0.18

2.3

61.5

44.1

Minor BPS

69.5

0.61

1.2

71.01

35.8

Associated Gene:

Gene:

OSCP1

Ensembl Gene ID:

ENSAPLG00000008275

Chromosome:

PEDO01012976.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021016

16820 - 28277

11458

ENSAPLT00000008626

22133 - 27701

5569

ENSAPLT00000031173

16820 - 28467

11648