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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012976.1_8000_8302_F


Intron Information:

Intron Rank:
17

Intron Class:
major-like

Intron Phase:
0

Intron Coordinates:
8000 - 8302

Intron Length:
303

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTGCCACAG

5'SS Class:
weak_major

3'SS Sequence:
CCCCCTGCTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCTCAT

U12 Branch Point Sequence:
CCCTCATCGACT

Flanking Amino Acid:
PAETTVAFPGGLQISGAEEL

Intron Amino Acid Position:
723

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
51.5
0.04
1.2
40.6
41.9

Major BPS
70
0.5
1.1
71.2
35.2

Major PPT
70.8
0.47
0.9
64.1
31.1

Minor 5ss
29.9
-2.3
3.2
29.7
43.2

Minor BPS
48.5
-0
1.9
64.33
46.1

Associated Gene:

Gene:
CSF3R

Ensembl Gene ID:

Chromosome:
PEDO01012976.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1656 - 8479
6824