Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013025.1_2695_2792_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2695 - 2792

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

CGTCCCGCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TGACATTTATAT

Flanking Amino Acid:

AKAAKKKLQALSNRLFEELA

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

63.5

42.9

Major BPS

79.2

0.73

75.3

39.4

Major PPT

69.3

0.44

0.9

61.6

34.9

Minor 5ss

27.1

-2.6

31.9

42.5

Minor BPS

45.7

-0.2

1.8

61.79

41.3

Associated Gene:

Gene:

GIT1

Ensembl Gene ID:

ENSAPLG00000027003

Chromosome:

PEDO01013025.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045436

21 - 5668

5648

ENSAPLT00000036267

21 - 5668

5648

ENSAPLT00000026402

21 - 5668

5648