Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013034.1_10545_10632_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10545 - 10632

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGACT

5'SS Class:

strong_major

3'SS Sequence:

TGCCCACCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAT

U12 Branch Point Sequence:

ATGGCCTCACCC

Flanking Amino Acid:

PETCTGDSSQCPPNLHKLDG

Intron Amino Acid Position:

457

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.8

81.2

32.3

Major BPS

0.3

1.3

65.3

43.7

Major PPT

0.34

0.9

54.8

35.4

Minor 5ss

29.5

-2.4

3.1

40.4

45.5

Minor BPS

48.7

-0.1

1.9

60.73

44.6

Associated Gene:

Gene:

ADAM11

Ensembl Gene ID:

ENSAPLG00000016351

Chromosome:

PEDO01013034.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017078

5542 - 12960

7419