Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013034.1_11566_11644_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11566 - 11644

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGCGAG

5'SS Class:

major

3'SS Sequence:

CCGTGCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGCCAT

U12 Branch Point Sequence:

TTGGTGCCATCG

Flanking Amino Acid:

EGSGWMQCNKQDVLCGFLLC

Intron Amino Acid Position:

528

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.1

53.4

39.9

Major BPS

47.8

-0.1

1.6

58.2

48.3

Major PPT

72.7

0.51

0.9

65.1

36.3

Minor 5ss

32.4

-2

3.4

42.9

45.3

Minor BPS

32.3

-1.4

2.3

39.2

44.5

Associated Gene:

Gene:

ADAM11

Ensembl Gene ID:

ENSAPLG00000016351

Chromosome:

PEDO01013034.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017078

5542 - 12960

7419