Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013034.1_12016_12083_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12016 - 12083

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGGACA

5'SS Class:

major

3'SS Sequence:

TGCCCCCTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TGCCCCCTCACA

Flanking Amino Acid:

WDGKICFDHGVCSNEGKCIC

Intron Amino Acid Position:

625

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

68.4

38.2

Major BPS

66.3

0.4

1.1

41.8

Major PPT

71.5

0.48

0.8

64.3

Minor 5ss

26.7

-2.7

2.9

23.7

36.8

Minor BPS

48.2

-0.1

2.1

62.45

43.3

Associated Gene:

Gene:

ADAM11

Ensembl Gene ID:

ENSAPLG00000016351

Chromosome:

PEDO01013034.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017078

5542 - 12960

7419