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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013034.1_9107_9189_F


Intron Information:

Intron Rank:
9

Intron Class:
major-like

Intron Phase:
2

Intron Coordinates:
9107 - 9189

Intron Length:
83

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTC|GTGAGCGCC

5'SS Class:
weak_major

3'SS Sequence:
CTCACCCTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCTCAC

U12 Branch Point Sequence:
TTGCCCATCACC

Flanking Amino Acid:
PEQSDTVHLFSGRTFQSSRS

Intron Amino Acid Position:
265

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
59.4
0.22
1.3
52.9
38.8

Major BPS
60.1
0.25
1.1
62.9
34.3

Major PPT
76.1
0.59
0.8
69
31.3

Minor 5ss
33.7
-1.9
3.3
42.8
38.8

Minor BPS
51.7
0.04
2.1
69
42.4

Associated Gene:

Gene:
ADAM11

Ensembl Gene ID:

Chromosome:
PEDO01013034.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

5542 - 12960
7419