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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013055.1_45948_47334_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45948 - 47334

Intron Length:

1387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAG

U12 Branch Point Sequence:

CATCCTAAGACC

Flanking Amino Acid:

TNATLSTFLEDLKKYGATTV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.5

40.6

Major BPS

0.2

1.5

65.8

39.5

Major PPT

81.1

0.7

73.3

31.6

Minor 5ss

32.9

-2

2.9

40.4

45.3

Minor BPS

43.8

-0.5

1.9

52.72

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019315

Chromosome:

PEDO01013055.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035264

45852 - 47544

1693