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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013063.1_3412_3508_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3412 - 3508

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCGT

5'SS Class:

strong_major

3'SS Sequence:

GCTTCCGTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

GCAGCTGTGACC

Flanking Amino Acid:

GDDPACGAAKGVAKVLPDSF

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

73.4

43.3

Major BPS

0.22

1.2

52.4

43.3

Major PPT

65.3

0.34

1.1

57.5

43.2

Minor 5ss

32.5

-2

3.4

47.7

47.8

Minor BPS

44.4

-0.4

2.1

50.26

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019494

Chromosome:

PEDO01013063.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025505

2566 - 4895

2330