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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013063.1_3692_4384_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3692 - 4384

Intron Length:

693

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CCCTGCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTCCAC

U12 Branch Point Sequence:

TTTCCCTCCACC

Flanking Amino Acid:

QDYQASCRRAAVGCVVGPWG

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

72.6

38.9

Major BPS

-0.1

1.3

55.7

39.5

Major PPT

0.41

0.8

60.3

29.7

Minor 5ss

31.3

-2.1

3.3

40.9

45.3

Minor BPS

59.6

0.28

76.58

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019494

Chromosome:

PEDO01013063.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025505

2566 - 4895

2330