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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013076.1_2763_3311_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2763 - 3311

Intron Length:

549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATACC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATTAT

U12 Branch Point Sequence:

CTCTCCTGCACA

Flanking Amino Acid:

KAECDETQTTGTFEKFINVI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

81.2

30.6

Major BPS

64.6

0.36

1.1

55.7

39.9

Major PPT

72.5

0.51

0.9

67.4

32.5

Minor 5ss

36.4

-1.5

2.8

46.5

41.8

Minor BPS

55.1

0.15

67.78

44.7

Associated Gene:

Gene:

NAGPA

Ensembl Gene ID:

ENSAPLG00000004291

Chromosome:

PEDO01013076.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004408

21 - 7768

7748

ENSAPLT00000039164

21 - 7616

7596