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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013076.1_3421_3731_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3421 - 3731

Intron Length:

311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGCCA

5'SS Class:

major

3'SS Sequence:

TGTGCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTGAA

U12 Branch Point Sequence:

TGTGAACGAACA

Flanking Amino Acid:

VHVDGQTETRGLNLWEMADF

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.2

42.9

Major BPS

54.3

0.11

1.4

49.1

46.3

Major PPT

82.7

0.74

0.9

76.8

37.3

Minor 5ss

30.6

-2.2

3.2

31.7

42.2

Minor BPS

-0.6

2.1

56.63

41.5

Associated Gene:

Gene:

NAGPA

Ensembl Gene ID:

ENSAPLG00000004291

Chromosome:

PEDO01013076.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039164

21 - 7616

7596

ENSAPLT00000004408

21 - 7768

7748