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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013076.1_3861_4707_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3861 - 4707

Intron Length:

847

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTGCT

5'SS Class:

major

3'SS Sequence:

CTTCTGTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTTAT

U12 Branch Point Sequence:

GCTTGCATACCT

Flanking Amino Acid:

GTLASYPSEHCSFDNMWRCP

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

71.5

38.5

Major BPS

0.5

59.6

38.6

Major PPT

77.1

0.61

0.8

68.8

37.1

Minor 5ss

34.1

-1.8

3.5

46.6

44.1

Minor BPS

46.9

-0.1

2.3

69.34

47.1

Associated Gene:

Gene:

NAGPA

Ensembl Gene ID:

ENSAPLG00000004291

Chromosome:

PEDO01013076.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039164

21 - 7616

7596

ENSAPLT00000004408

21 - 7768

7748