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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013076.1_4917_5951_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4917 - 5951

Intron Length:

1035

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTCAC

5'SS Class:

major

3'SS Sequence:

TGTATTTGCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTGTTGTTAATG

Flanking Amino Acid:

NCSLHGTCTASGCLCDAGWV

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

61.7

38.8

Major BPS

84.4

0.85

34.5

Major PPT

73.2

0.52

68.2

42.2

Minor 5ss

-2.1

45.5

42.6

Minor BPS

57.3

0.09

2.1

66.18

42.5

Associated Gene:

Gene:

NAGPA

Ensembl Gene ID:

ENSAPLG00000004291

Chromosome:

PEDO01013076.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039164

21 - 7616

7596

ENSAPLT00000004408

21 - 7768

7748