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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013076.1_6000_6413_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6000 - 6413

Intron Length:

414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACACTG

5'SS Class:

major

3'SS Sequence:

TTGTCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTGAT

U12 Branch Point Sequence:

AAAGCCTGATGC

Flanking Amino Acid:

AGWVGSNCSEACASGFYGDA

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.2

66.4

45.1

Major BPS

0.27

1.3

53.3

44.2

Major PPT

86.1

0.81

0.8

81.1

30.9

Minor 5ss

41.1

-1

3.2

56.5

47.6

Minor BPS

42.3

-0.6

1.9

47.81

41.3

Associated Gene:

Gene:

NAGPA

Ensembl Gene ID:

ENSAPLG00000004291

Chromosome:

PEDO01013076.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039164

21 - 7616

7596

ENSAPLT00000004408

21 - 7768

7748