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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013096.1_1350_1452_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1350 - 1452

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TCCCCGCAGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

CCCCATTTAACC

Flanking Amino Acid:

KTPPDHREVEDPPTPPPDPP

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

84.6

33.2

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

58.3

0.19

53.7

35.6

Minor 5ss

41.9

-0.9

3.1

59.6

38.8

Minor BPS

0.04

1.6

56.02

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026181

Chromosome:

PEDO01013096.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028528

33 - 1869

1837